What a great collaboration. Check out some of the pictures from the trip below.
[Lab news] Baumann & Therkildsen lab on a silverside road trip
What a great collaboration. Check out some of the pictures from the trip below.
12 October 2018. This year, the Department of Marine Sciences at UConn Avery Point has conducted his first graduate course on physical and biological oceanographic methods, which culminated in a two day research cruise aboard the newly stretched R/V Connecticut. The cruise sampled stations from Eastern Long Island Sound all the way out the continental shelf, deploying CTD’s, sediment corers and grabs, as well as zooplankton and nekton nets. Callie and Hannes from the Baumann lab were part of the fun!
Check out some of the action in the youtube clip below.
14 June 2018. Members of the Baumann and Mason lab went on a trip to Mumford Cove, today, and Chris Tsang went along with his GoPro. Thanks to Charlie, the skipper, the ride was smooth and a pleasure, a swapping our pH, Temperature, oxygen, and salinity sensor was successfully swapped with a new one recording for the next weeks in 30 minute intervals. Wes Hoffman from the Mason lab, collected zooplankton with a Bongo-net. Sydney Stark, our NSF-REU student this summer, came along just for the fun.
See the fun for yourself!
Click on the link or the image blow to access the article in UConn Today …
We are overjoyed to announce that NSF is funding a new and collaborative research project to look at the genomic underpinning of local adaptation in the Atlantic silverside! Check out below for a first glimpse of the project website.
Oceans are large, open habitats, where it was previously believed that the lack of obvious barriers to dispersal would result in extensive mixing, thereby preventing organisms from adapting genetically to particular habitats. It has recently become clear, however, that many marine species are subdivided into multiple populations that have evolved to thrive best under contrasting local environmental conditions. Nevertheless, we still know very little about the genomic mechanisms that enable divergent adaptations in the face of ongoing intermixing.
This research feature makes the case for multistressor research to a broad general audience and introduces our NSF project and its participants. Download the feature by clicking on the pictures or the link below.
On this dimly lit November afternoon, rain mercilessly drenched scientists and crew on board the R/V Auk as it slowly navigated the waters of Stellwagen Bank. A world like a wet sponge. Sky and ocean, indistinguishable.
Thanksgiving, the next day.
Despite the circumstances, the team’s mood was nothing short of elated. Our small beam trawl had just spilled hundreds of silvery fish on deck, wriggling like eels. They were Northern sand lance (Ammodytes dubius).
Running ripe adults.
Spawning.
Apparently, they like Thanksgiving, too.
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As the ship docked back in the Scituate, Mass., harbor that day, the rain thinned to hazy darkness.
“Let’s get a coffee and then on the road,” mumbled Chris, who led the team, “the real work of the experiments has just begun.”
Sand lance have a few interesting and rare characteristics. They alternate between schooling and foraging in the upper water column and extended periods of being almost completely buried in sand. For that, they rely on sand of a particular grain size and with very little organic content. It’s the kind of sand that defines large areas of the Stellwagen Bank.
Surprisingly little is known about the ecology and ecosystem importance of this sand lance species, although research on its European relatives (A. tobianus, A. marinus) is more advanced. In particular, experiments on early life stages of Northern sand lance have been lacking, save for some pioneering work on rearing methods of the related A. americanus (Smigielski et al. 1984). One question that was of particular interest to our lab involved the potential sensitivity of this fish species to carbon dioxide (CO2). That’s due to two other interesting and rare characteristics of sand lance. They spawn in late fall and winter in cold (and still cooling) waters, which is why their eggs and larvae develop extremely slow compared to other, more typical spring and summer spawning species. In addition, the species is found not in nearshore, but offshore coastal waters, where smaller seasonal and daily CO2 fluctuations more closely resemble oceanic conditions. Could sand lance offspring be particularly sensitive to higher levels of oceanic carbon dioxide predicted during the next 100 to 300 years as climate change effects intensify?
Our experiments are still ongoing, and rearing protocols are being improved.
The preliminary findings, however, are stunning. Survival to hatch was dramatically reduced under elevated and high compared to baseline CO2 conditions. It was severely lowered at higher (10°C or 50°F) compared to lower temperatures (5°C or 41°F). Our second experiment this year appears to repeat this pattern. If these results continue, that would mean sand lance is one of the most CO2-sensitive species studied to date.
General interest in sand lance goes beyond its sensitivity to carbon dioxide. Given the species importance for the ecosystem and coastal economy, there are now increasing efforts to better understand sand lance feeding ecology, distribution and relationship to the rest of the food web. In this regard, funding of our project by the Northeast Sea Grant Consortium proved prescient and a seed for subsequent grants from MIT Sea Grant and the Bureau of Energy Management (BOEM) to continue the work. Surely, the groundswell of interest in sand lance is commensurate with its importance and will enable insights into better management strategies for sensitive ecosystems like those along the U.S. Atlantic coast.
Collaborators on this project are: D. Wiley of the National Oceanic and Atmospheric Administration-Stellwagen Bank National Marine Sanctuary; P. Valentine of the U.S. Geological Survey; and S. Gallagher and J. Llopiz, both of the Woods Hole Oceanographic Institution.
By H.B.
Somewhere after Richmond, VA, the sun sets and traffic on the I-95 begins moving better. At long last. The four people in the burgundy Dogde Challenger have all already cycled through their driving shifts once and dare an impatient glance at the time left. Still more than 8 hours. More than 8 hours to reach this very special location at the Atlantic coast – Jekyll Island, Georgia. In the trunk of the car a jumble of coolers and a beach seine, buckets, air pumps, and hoses topped with the crumpled witnesses of roadside dining. This is no ordinary road trip.
We, that are Aryn and Nicholas from the Therkildsen lab of Conservation Genetics lab at Cornell University and James and Hannes from the Fish Ecology Lab here at UConn; we went on this road trip to catch live, spawning ripe Atlantic silversides from the southern edge of the species distribution. We then intended to bring these fish back to UConn alive, sample another population from the south shore of Long Island (Patchogue, NY) and produce genetic crosses of these populations.
The broad goal of our expanding collaborative efforts with our geneticist friends from Cornell is the creation of an annotated genome of this species, which will be an important milestone in deepening or understanding of the molecular and genetic responses of organisms to local selection regimes and marine climate change. Given the Atlantic silverside’s ecological importance as an abundant forage fish along the American east coast and it’s rich history as a model organism in evolutionary and ecological studies, the annotated genome is the next logical step.
Even at hindsight, the plan still seems a little insane. But it worked. We indeed managed to catch spawning silversides at the Georgia site and then transported them immediately back to our Rankin Lab, which involved another 17 hours of driving back. After securing samples from Patchogue, we indeed managed to cross single parents from each site to produce full-sib crosses that will later be used to produce what geneticist call a linkage map. Other across and within-population crosses will be used to study gene expression at two different temperatures or raise adults for producing an F2 generation.
The silverside larvae are currently well, feeding, and growing up nicely. We all cross fingers for this enterprise to end in good samples and a step forward for genetic studies on a marine fish.
NOAA sanctuaries just published a little blurb online, introducing sand lance and it’s importance to the Stellwagen Bank National Marine Sanctuary, including a small section on the current research efforts funded by NOAA Regional SeaGrant.
“To that end, the team is collaborating with scientists from the University of Connecticut (UConn). UConn study members transport live-caught sanctuary sand lance to their lab, where further generations of sand lance are raised. The resulting larval sand lance are raised in high-tech rearing facilities that can be adjusted to mimic future ocean conditions.”
The entire article can be accessed by clicking on the link below
http://sanctuaries.noaa.gov/news/jan17/sand-lance-stellwagen-bank.html
Check out some footage of the trip and the beam trawl operation on board of captain Steve’s fishing vessel