Presentations

Feeling the pulse of Mumford Cove

Posted on March 23, 2023March 23, 2023 by Hannes Baumann

23 March 2023. For almost 8 years now, the Evolutionary Fish Ecology Lab has conducted research in nearby Mumford Cove, a small, eelgrass covered embayment on eastern Long Island Sound. Using a set of battery-powered probes we have continuously measured temperature, pH, oxygen, salinity, and depth in 30 min intervals in the Cove - almost 120,000 times. This ongoing effort is not funded by any grant or institution; instead, it has been sustained over all these years by the firm belief in the prescient, if undervalued societal service of monitoring, an activity without short-term reward but important long-term benefits in understanding how ecosystems change on short and long time-scales. To commemorate the effort, we simply thought that it is time to show you some data, some pictures, and draw some early, cautious conclusions about the very interesting case of Mumford Cove. Have a look!

Fishing for silversides … in Chile!

Posted on October 13, 2022October 15, 2022 by Hannes Baumann

Concepcion (Chile), 12 October 2022. Two incredible weeks of adventure and scientific exploration for new and potentially groundbreaking science are coming to a close. In preparation for next year’s sabbatical, Hannes has met and made friends with colleagues at the Universidad the Concepción in southern Chile, travelled some 2,000 miles along the stunning Chilean coast, scoured local fish markets and accompanied artisanal fishermen on their nightly pursuits. The goal: finding a small fish that looks all too familiar – a silverside!

The Chilean silverside (Odontesthes regia), locally known as ‘pejerrey’, looks eerily similar to the Atlantic silverside (Menidia menidia), the model that has already inspired decades of eco-evolutionary research across many labs including ours. And like its northern hemisphere cousin, Chilean silversides occur over an astounding geographical range along the South American Pacific coast, all the way from Puerto Montt (42°S) to southern Peru (10°S)! There, average coastal temperatures change predictably with latitude and therefore provide a natural climate gradient in space that could serve as an analogue to climate change in time. Whether and how Chilean silversides show similar local adaptations to their latitudinal gradient is a big question – and next year’s sabbatical will start to provide some important answers.

To prepare, Hannes spent two weeks in September and October 2022 in Chile. Hosted by the ever-enthusiastic Prof. Mauricio Urbina from the zoology department and thanks to a visiting grant from the university, we were ready to start exploring. Our specific goal for this trip was to find spawning-ripe pejerrey in two of the planned four locations along the coast.

The luck was on our side and the timing of the visit turned out to be perfect. On a nightly fishing trip with the artisanal fisherman Juan Figueroa from the small village of Tumbes near Concepción, we caught running ripe males and females, observed naturally deposited egg masses in nearshore waters, and were able to subsequently document the temperature-dependent development of newly fertilized embryos.

On an epic road-trip up the coast all the way to Coquimbo, Hannes and graduate student Rocio Barrios stopped at many villages and local fish markets, gathering information and finally securing precious samples of spawning-ripe pejerrey from a fisherman at the Coquimbo fish market. Transporting the embryos was a success, too, thereby paving the way for the proposed research plan next year.

The real, big common garden experiments will take place from September – December 2023 at the Dichato Marine Station near Concepción, a small but recently renovated station with excellent facilities for our purposes.

Hannes & Max at the 45th Larval Fish Conference in San Diego

Posted on September 7, 2022September 13, 2022 by Hannes Baumann

2 September 2022. After two grueling years of pandemic restrictions, Zoom conferences and meetings, the Baumann lab was as elated as anyone else to attend the first in-person conference again! Hannes & Max went to beautiful La Jolla in San Diego to participate in this years 45th Larval Fish Conference (Aug 29 - Sep 2). The stunning setting of the Scripps campus amidst the sound of the Pacific Ocean breeze provided the right kind of backdrop to again mingle with colleagues, meet fellow graduate students for scientific and just fun discussions, while an eclectic number of talks across the spectrum of Larval Fish and Larval Biology renewed the inspiration for our science. Hannes gave a keynote about our recently published work on sand lance CO₂ sensitivity, while Max presented his first conference talk about juvenile Black Sea Bass growth and energy allocation.

A big, heartfelt thanks to Noelle Bowlin (NOAA) and her team for pulling off this remarkable conference during these still uncertain, post-COVID times!

World Ocean’s Day at 3rd grade Groton Elementary School

Posted on June 21, 2022June 21, 2022 by Hannes Baumann

7 June 2022. This is World Ocean Week and many Marine Science students and faculty do their bit to increase outreach to our community. Hannes had the privilege of dropping by the 3rd graders of the Catherine Kolnaski Magnet School, talking about what Marine Scientists do, which ocean critters eat another and "What was the weirdest fish you ever caught?" Oh, and "Are you really sure that the Megalodon [Charchardon megalodon] is no longer alive?" Thank you to Mr. Moon, Mrs. Laudone for the opportunity to come visit the school!

Unveiling a new sturgeon outreach sign at Hammonassett State Park

Posted on May 17, 2022May 17, 2022 by Hannes Baumann

SturgeonSign03 — On May 7th, project members, CTDEEP, and CT SeaGrant representatives unveil the new outreach sign about Atlantic sturgeon at Hammonassett State Park (f.l.t.r. Mason Trumble, CTDEEP deputy commissioner; Tom Savoy, CTDEEP scientist; Kelli Mosca, CTDEEP; Joe Cunningham, CTDEEP; Hannes Baumann, UConn; Sylvain Deguise, CT SeaGrant Director; Jacque Benway, CTDEEP

May 7th, 2022. Despite the chilly, rainy weather on Hammonassett Park's Meigs Point and the resultant lack of a beach crowd, the mood among the group was elated and proud. For over two years, our lab together with researchers from the Connecticut Department of Energy and Environmental Protection (CTDEEP, Tom Savoy, Jacque Benway) have worked tirelessly to better understand the growth and seasonal movement patterns of Atlantic Sturgeon (Acipenser oxyrhynchus) in Long Island Sound and the Connecticut River. The research project was funded by Connecticut SeaGrant (NOAA Award NA18OAR4170081, Project R/LR-29).

Kelli Mosca did her M.S. thesis research using fin spine sections for growth analyses and telemetry data for movement patterns. After defending in March 2022, she immediately accepted an offer by CTDEEP to become a full time staff scientist. Congrats again, Kelli!

The sign was designed by Joe Cunningham with pictures from Jacob Snyder (RedSkiesPhotography.com). It combines several outreach goals. 1) Convey to people that these ancient, iconic fish actually occur in our waters, 2) teach the interested readers that sturgeon spawn in freshwater and then grow up in saltwater, 3) give readers a sense of the ongoing research on Atlantic sturgeon, 4) tell the public that sturgeon may come back to Long Island Sound and River, but need protection. Particularly, they rely on any accidental catches to be released and reported. The sign is also available in Spanish language to broaden its reach.

Kelli Mosca presents Master thesis research on Atlantic Sturgeon

Posted on March 21, 2022March 23, 2022 by Hannes Baumann

21 March 2022. Today, Baumann lab graduate student Kelli Mosca presented her Masters thesis entitled "Atlantic sturgeon (Acipenser oxyrinchus) Growth and Habitat Use in the Connecticut River and Long Island Sound". She did a marvelous job summarizing the multifaceted findings on age and growth of Atlantic sturgeon in the eastern Long Island Sound and the Connecticut River, their movement patterns based on analyses of acoustic telemetry data, while evaluating the evidence for indications that Atlantic sturgeon may utilize the Connecticut River again for spawning.

Kelli was an inspirational and cherished member of the Baumann lab, who literally mastered the challenges of being a 'whole-pandemic' Master student. Her dedication and continued work for CTDEEP were awarded by an offer for a CTDEEP Fishery Biologist I position, which she has wholeheartedly accepted. Congratulations Kelli, and all the best for the next steps in your career!

The UConn Department of Marine Sciences
Presents a Master’s Thesis Presentation by

Kelli Mosca
B.S., University of New Haven, 2017

12:00 p.m., Monday, March 21, 2022
Lowell Weicker Building, Seminar Room 103 or Via WebEx

**Atlantic sturgeon (Acipenser oxyrinchus) Growth and Habitat Use in the Connecticut River and Long Island Sound**

Atlantic sturgeon (ATS, Acipenser oxyrinchus) are long-lived, anadromous, and endangered fish with a wide geographical distribution along the east coast of North America. Historically known to spawn in numerous rivers, many spawning runs ended due to intense fishing pressure and habitat obstruction in the 19th and 20th centuries. This was thought to be true for the longest river in the US Northeast, the Connecticut River, until pre-migratory ATS juveniles appeared in the river in 2014. Here, I use a long-term archive of fin spine samples and three years of acoustically tagged ATS to generally expand knowledge about the ATS using the CT River and LIS, and specifically examine these empirical data for potential evidence of re-emergent spawning behavior. I analyzed 301 sections of ATS fins spines collected from 1988-2021 to determine age, annuli widths, and thus population- and individual-based growth patterns. I found that the vast majority of ATS in my study area were juveniles and sub-adults with an average (± SD) age of 7.5 ± 3.1 years and an average (± SD) length of 101 ± 26 cm. The weighed, population-based Von Bertalanffy growth model estimated a K of 0.08 (95% CL, 0.01/0.17) and a L∞ of 171.2 cm (95% CI, 129/547 cm), the latter likely showing signs of missing large adults. K and L∞ distributions showed no sign of sex-specific multi-modality. Longitudinal length back-calculations revealed the selective disappearance of faster growing phenotypes (at ages 2-6) with increasing age at capture, which is clear evidence for Lee’s phenomenon. Acoustic detections of telemetered Atlantic sturgeon (2019-2021) revealed that most sturgeon in 2019 and 2020 utilized the Lower CT River (brackish water), whereas in 2021 detections were highest in LIS (salt water). Detections in the Upper CT River (freshwater) were common but much less dense across years, with 53%, 69% and 45% of ATS detected in the Upper CT River at some point in each season (2019-2021 respectively). I found a positive relationship of fish proportion in the CT River with temperature, but an inverse relationship of fish proportion in the CT River with river discharge. On average, the arrival of fish in the CT River occurred in June, when water temperatures were 17.5 - 24.9 ºC, while the departure from the CT River generally occurred in October, coinciding with river temperatures of 15.2 - 20.4 ºC. Some of the fish utilizing the Upper CT River made directed movements to a potential spawning ground at Portland, CT (river km 47). However, these movements occurred in mid- to late August (12th -23rd), which is inconsistent with the typical spring timing of ATS spawning runs in northern populations. Fall spawning runs are only known for southern ATS populations. In addition to timing, ATS sizes in the Upper CT River also do not support spawning behavior, because fish of all sizes (72 – 154 cm TL) and ages (3-15) visited the Portland area for 0.25 – 63.25 days. I conclude that neither age nor telemetry data support the re-emergence of the CT River as an ATS spawning ground. Future work will benefit from a more even sampling of gear sizes and should examine possible explanations for ATS freshwater utilization including feeding and individual preferences.

Major Advisor: Hannes Baumann
Associate Advisor: Eric Schultz
Associate Advisor: Tom Savoy
Associate Advisor: Jacque Benway
Associate Advisor: Catherine Matassa

Hannes gives DMS Friday seminar on sand lance ecology

Posted on March 4, 2022March 4, 2022 by Hannes Baumann

4 March 2022. Hannes was the invited speaker at today's Friday seminar of the Department of Marine Sciences. His talk gave an overview of the research highlights of our multi-disciplinary and multi-institutional efforts to better understand basic ecological facts, population connectivity & structure, and the unusually high CO₂-sensitivity of sand lance embryos. The remotely given presentation was attended by 62 people, some of which listened in from as far away as Norway!

The talk was recorded and can be accessed via the public link below.

Baumann, H. 2022. The unusual ecology & climate sensitivity of sand lance, a key forage fish on the Northwest-Atlantic shelf. UConn Marine Sciences Friday seminar. Online. 4 March 2022.

The unusual ecology and climate sensitivity of sand lance, a key forage fish on the Northwest-Atlantic Shelf

No matter how you look at these small, slender-bodied fishes that at times live buried in sediment or emerge as dense pelagic schools, northern sand lance (Ammodytes dubius) easily awe even the most hard-to-impress scientist or naturalist. Their unusual behavior, patchy occurrence, and reproductive timing are paralleled by their extraordinary importance as forage fish that sustain well-known hotspots of iconic predators (cod, tuna, sharks, seabirds, whales) all across the Northwest Atlantic shelf. And yet, despite their recognized role as the ‘backbone’ of many shelf ecosystems, we still don’t understand many basic aspects of sand lance ecology, population structure and their vulnerability to manmade climate change. Over the past years, our lab has been working alongside other US and Canadian research groups on multiple sand lance projects that have produced stunning new insights into these enigmatic fish. This seminar will outline some of the highlights. We discovered that the seasonal growth of these fish relies heavily on the lipid-rich copepod Calanus finmarchicus and showed that after a dormancy period in summer they spawn on Stellwagen Bank for just a brief period at the end of fall. To resolve questions of connectivity between sand lance areas, we performed large-scale Lagrangian drift simulations that suggested areas of high, low and negligible retention of sand lance offspring and showed overlaps with planned offshore wind lease areas. A large collaborative effort succeeded in obtaining specimens from across the entire distributional range (Greenland to Mid-Atlantic Bight), and subsequent whole genome sequencing newly revealed a stark genomic differentiation between northern and southern population clusters. Last, we performed multiple years of rearing experiments on embryos that consistently showed an unusual sensitivity of sand lance to future, high CO₂ oceans. When coupled with regional, end-of-century pCO₂ projections we estimate that rising CO₂ levels alone could reduce sand lance hatching success to 71% in 2100 relative to today. Warming, acidification, and habitat exploitation therefore emerge as key factors lining up against the future productivity of this forage fish, which is so critically important across Northwest-Atlantic shelf ecosystems.

Video: A November day on Stellwagen Bank

Lucas Jones presents his Masters Thesis research!

Posted on November 27, 2021November 27, 2021 by Hannes Baumann

The UConn Department of Marine Sciences

Presents a Master’s Thesis Presentation by

Lucas Jones

B.A., University of Connecticut, 2018

4:00 p.m., Monday, November 22, 2021

Marine Sciences Building, Seminar Room 103

**Using Low-Coverage, Whole Genome Sequencing to Study Northern Sand Lance (Ammodytes dubius) Population Connectivity in the Northwest Atlantic**

Northern sand lance (Ammodytes dubius) are key forage fish in Northwest Atlantic (NWA) shelf ecosystems, where they exclusively occur on coarse-grain, offshore sand banks. This patchy occurrence may result in genetically more fragmented, less connected populations, but traditional morphological or genomic approaches have so far been unsuccessful in fully resolving the species’ population structure and connectivity. My study pursued an alternative genomic approach, using low-coverage, whole genome sequencing (LcWGS) to address these important questions. I extracted DNA from 273 A.dubius specimens collected by collaborators from sevenregions across the species geographical range, from Greenland to New Jersey, USA. From LcWGS data, I identified 11,558,126 single nucleotide polymorphisms (SNPs) that allowed quantifying genetic differentiation between populations (F_ST), thereby revealing the genetic structuring of populations throughout the NWA. Despite the potentially homogenizing influence of the general north to south ocean circulation, I found a clear genetic break around Nova Scotia that delineated a northern from a southern A. dubius supergroup. Only within the southern supergroup, genetic distances increased with the geographic distance between sample sites. At the focal site of Stellwagen Bank (southern Gulf of Maine), A. dubius samples collected over several years (2014 – 2019) revealed small but significant temporal genetic differences that imply varying occupation of this offshore habitat by genetically different sand lance contingents. Inclusion of samples from the inshore congener A. americanus confirmed the clear genetic separation between both species and further determined that all sand lance caught on Stellwagen Bank are exclusively A. dubius. Overall, my work suggests the existence of two spatially distinct A. dubius populations with little ‘realized’ connectivity, which is critical knowledge to aid protection and management of offshore marine resources.

Major Advisor: Hannes Baumann

Associate Advisor: Nina Overgaard Therkildsen

Associate Advisor: Senjie Lin

44th Larval Fish Conference held virtually 24-26 June

Posted on July 3, 2021July 3, 2021 by Hannes Baumann

Groton, CT 24-26 June 2021. The long awaited and anxiously prepared virtual 44th Larval Fish Conference was held, featuring more than 240 participants from 28 countries. 58 scientific talks, including 3 keynote lectures were given via Cisco’s WebEx platform, whereas networking activities such as poster presentations, ‘Meet the Speaker’ events, and Mentor hours used the innovative Gatherly platform. The technology was working out well, the preparation paid off, and delegates were overall enthusiastic about this virtual alternative, which was forced on us by Covid-19, but may have shown us new ways and concepts to broaden the societies reach and equality.

The post-conference website is housed at https://lfc44.marinesciences.uconn.edu

Special thanks go to the scientific steering committee Eric Schultz, Jacqueline Webb, and Paul Anderson. Lauren Schaller, Anne Hill, Harley Erickson, and Kate Copeland from UConn’s conference services did a great job as well preparing and running parts of the events. Support came from NOAA’s Northeast Fisheries Science Center.

‘Hooked on OA’ – Hannes talks about fish CO2 sensitivity to recreational anglers

Posted on March 1, 2021March 1, 2021 by Hannes Baumann

25 February 2021. The Mid-Atlantic Ocean Acidification Network (MACAN) organized a four-part webinar series on Ocean Acidification geared specifically towards recreational anglers and shellfish collectors in the Mid-Atlantic region. The series is called “Hooked on OA” and invited Hannes on this February Thursday to explain the state of OA science particularly for fishes. A big thanks to the organizers and the more than 50 people who participated in this webinar.

If you missed it and are still interested, you can watch the Zoom webinar here: